Northeast Fisheries Science Center
Oceanography at the NEFSC
Steps to processing salt samples for comparison with flow through values
Joyce Dennecour sends .xls files calle alXXYY_FTO_Z.xls where XX is the year, YY the cruise, and Z the leg.
I export a comma delimited "_com.txt" files (after cut & pasting data to separate file) where columns are:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21
gpm pgm mm dd yy hh mm ug/Ldisplay cleaned case btl# Chl# hh mm ug/Lblank ug/Ldisp ug/Llow ug/Lhi ChlA sal initials
manually edit to rid of blank salt records to make AL0103_FTO_Z_com_new.txt
perl ~/ship/readfto.plx alXXYYlZ/alXXYY_FTO_Z_com_new.txt which runs a MATLAB job and makes "saltcal.jpg" and "saltcal2.jpg"
if there is any trouble here one may run the "readfto.m" matlab on its own after specifying cru='alXXYYlZ'
joe edit/modify alXXYYlZ.html by inserting "ph/cruise/saltcalhtml.dat" and change the cruise code in that segment
check on data6/ship/salt_offsets.dat