Northeast Fisheries Science Center
Oceanography Branch

Acoustic Doppler Current Profiler
Post-Processing Status
ctd image

Contents

History
Steps to Acquisition
Steps to  Post-Processing
Table of Processed Cruises & links to cruise specific results
References & related web sites

History

  • Pre-VMDAS  (prior to 2001)
  • While the ADCPs were installed on the ALBATROSS and the DELAWARE in the early 1990's,  they were not used on a regular basis.  Except for a few GLOBEC cruises when chief scientist specifically requested it, the data was rarely logged. When it was logged it was very rarely archived.  When it was archived, it was rarely useful because of inappropriate configurations and/or acoustic interference from other units (AMETEK speed log and/or the EK500).

    However, a few ADCP experts were able to extract some usable data.  Julio Candela (WHOI) was able to process a few cruises. Using  the CODAS  MATLAB-based post-processing routine, developed by Eric Firing (UHAWAII) and modified by Charlie Flagg (Brookhave Nat. Lab), we were able to edit and navigate the data using the CODAS system for a couple cruises but it was a laborious, time-consuming, and uncertain process.

    Prior to year 2001, NEFSC ADCP's collected data with the RDI transect program, a DOS-based program.  Just when we were finally beginning to understand the processing steps associated with this system, RDI switched to their VMDAS, a Windows based program.  The major change, however, was not the operating system but the format of the output files.  Hence,  we needed to basically start from scratch due to this change of acquisition and processing software in 2001.

  • VMDAS
  • In the spring of 2001, Jim Manning, Bobby Yates, and Henry Jenkins, initiated a new effort to start logging and processing data on a routine basis. The homegrown Candela and CODAS methods could not be directly applied to the new RDI output files. After a short review of the ADCP principles, a set of test were conducted on a series of ALBATROSS cruises.  The first objective was to eliminate any potential interference from the AMETEK speed log.  Having collected at least one cruise without the AMETEK interference (AL0105), we could begin processing.  In the summer of 2001,  correspondence with Jules Hammond (UHAWAII) who was in the process of developing an interface between VMDAS output and CODAS was very helpful.  She and Eric Firing posted these new routines so they could be downloaded. In the summer and fall of 2002, the AMETEK was shut down for periods during AL0207 (Scott Gallager's Cruise) and AL0210L2 but very little progress was made towards a routine system. Also, an instrument change was made about this time from a Broadband 300 Khz to an OceanSurveyor 150 khz which required yet another operation with slightly different procedures.

    Finally,in last half of 2007, with the new ship R/V BIGELOW coming online and a more easy-to-use CODAS software from UHAWAII now available, another push towards collecting data was initiated. Thanks's to the help of shipboard technicians Peter Gamache and Mike Murray, a series of LTA files were collected and attempts were made to process them. Attempts were made to compare the ship board ADCP with nearby moored ADCP data. Since there was obvious problems with the data, arrangements were made to meet with WHOI and URI experts in order to get help in both the setup of the acquisition software and the post-processing of the data. Sandy Fontana (URI), for example, helped us set up the proper configuration file "Bigelow150BB.ini" which calls "Bigelow150BB.txt". The latter has a set of commands that we collectively constructed and will put to test.

    In the future, we might consider a realignment of the instrument to have beam #3 set at 45 degrees as now suggested by RDI in field service bulletin #158.

Steps to Acquisition
  • Click on VMDAS --> options --> ADCP Setup --> specify correct .ini file (Bigelow150BB.ini, for example, which should read Bigelow150BB.txt)
  • Click on VMDAS --> options --> recording --> specify correct cruise name prefix for the files to be created according to the convention "HB0710Leg1", for example
  • start acquisition
  • make sure the GYRO does not overload the log file w/too frequent feeds (otherwise the POSMV direction info might be used or the SCS could subsample the gyro feeds)

Steps to Post-Processing
  • Click VMDAS software Icon (optional method not part of our standard operation)
    • reprocess .vmo data
      • with latest "data screening" options by
        • clicking on the upper left hand  "edit data  setting icon"
        • deselecting various thresholds
      • may need to change the "readonly" access of this .vmo file
      • set "averaging" sta to 60 seconds and lta to 1200 seconds (20 minutes)
      • this step takes a loooooong time!!! overnight operation
    • or playback .enx data
      • click on "playback data"
      • hide unwanted displays
      • expand or contract scales w/zoom icon
  • Click WinADCP software Icon  (for inital viewing of data; optional method not part of our standard operation)
    • open the ".sta" file for 1-minute averages
    • select "option" for chart scaling to look at data
    • select "option" for Maximum ensembles to be put in sub section
    • "export" to MATLAB file after selecting series plot  (optional)
  • Alternatively and preferably, follow the VMDAS/CODAS steps currently under development and detailed in Cookbook.html
  • Submit CODAS blk files to national ADCP archive


Table 1:  Cruises
Cruise
(raw vectors)
Type
(time series)
Region
(contoured section)
Data Quality
(panel plots)
Date Last Modified
(postcal vectors)
Cruise date
(post auto edit)
HB07_217? ? SNE testing Aug 2007 July 2007
HB07_218? ? GOM testing
Sep 2007 Aug 2007
HB070? Groundfish MAB testing Oct 2007 Sept 2007
HB0710 testing Northern MAB testing Nov 2007 Jan 2008
HB0801 testing Northern MAB Mar 2008 Mar 2008
HB0802 Bottom Trawl II Northern MAB testing Mar 2008 Mar 2008
HB0803 Bottom Trawl III MAB testing Apr 2008 Mar 2008
HB0804 Bottom Trawl IV Georges Bank good 17 Apr 2008 1-11 Apr 2008
HB0805 ???? Gulf of Maine good 15 May 2008 15-24 Apr 2008
CI193 MIT joint program Northern MAB testing Apr 2008 Jun 2004
CI199 MIT joint program Northern MAB testing Apr 2008 Jun 2005
HB0806 ???? Mid Atl. Bight good 2 Jul 2008 May 2008
HB0807 ???? Georges Bank good 2 Jul 2008 28 May - 6 Jun 2008
HB0808 ???? Mid Atl. Bight good 2 July 2008 10-13 June 2008
HB0809 ???? off Long Island NY too shallow 2 Jul 2008 18-19 Jun 2008
HB0810 ???? South of Martha's Vineyard too short 2 Sep 2008 11-12 Jul 2008
HB0811 ???? SNE shelf 3 short time periods 2 Sep 2008 6-11 Aug 2008
HB0812 ???? Georges Bank bad lat/lons but good 2 Sep 2008 13-26 Aug 2008
HB0813 ???? MAB 3 short time periods 4 Feb 2009 Fall 2008
HB0814 ???? SNE shelf 4 Feb 2009 Fall 2008
HB0815 ???? Georges Bank nice tides 4 Feb 2009 Oct 2008
HB0816 ???? Gulf of Maine nice tides 4 Feb 2009 late Oct 2008
HB0817 ???? GoM and Nant. Shoals nice tides 4 Feb 2009 Nov 2008
HB0901_Leg1 Bottom Trawl Mid.Atl.Bight good 31 Aug 2009 early March 2009
HB0901_Leg2 Bottom Trawl NMAB good 31 Aug 2009 late March 2009
HB0901_Leg3 Bottom Trawl Nant Shoals good 31 Aug 2009 Early April 2009
HB0901_Leg4 Bottom Trawl Georges Bank good 31 Aug 2009 late April 2009
HB0901_Leg5 Bottom Trawl GoM good 31 Aug 2009 early May 2009
HB0902_Leg1 MARECO SNE good 2 Sept 2009 8-9 June 2009
HB0902_Leg2 MARECO w/deep and shallow SNE good 2 Sept 2009 10-11 June 2009

References/Links





For further information contact: James.Manning@noaa.gov

Return to main Oceanography Page